RESULTS FOR rrmc

Meta-Server Query : rrmc

Query sequence :

EGCNLFIYHLPQEFGDAELMQMFLPFGNVISSKVFIDRATNQSKCFGFVS
FDNPASAQAAIQAMNGFQIGMKRLKVQLKRPKDASRPY
View BLAST search results and the CLUSTALW multiple alignment output from the NPS@ Server

Requests were FUGUE 3D-PSSM mGenThreader

No results from mGenThreader

or View the Pairwise Sequence Alignment HTML page See and Download the Pairwise Sequence Alignment File (in PIR format)

Select line(s) and click "View Subset"

A blue score means a significant Hit

3D-PSSM [results]					.........10........20........30........40........50........60........70........80........90........100.......110.......120.......130.......140.......150.......160.......170.......180.......190.......200.......210.......220.......230.......240.......250.......260.......270.......280.......290.......300.......310.......320.......330.......340.......350.......360.......370.......380.......390.......400.......410.......420.......430.......440.......450.......460.......470.......480......
	E-value	ID	PDB link	AA	-------------------------------------E--------G----C-NLFIYHLPQEFGDAEL----MQMFLPFGNVISSKVFIDRAT--------------------------------------------------------------------------------------NQSKCFGFVSFDNPASAQAAIQA----MNG--------------------------------------------------------------------------------------FQ--I--GMKRLKV-QL-KRP------------------------------------------------------------------------K------------D--------A----S------------------------------------------------------------RP------Y
	5.98e-02	34%	1G2E Chain A	[167 aa]	-------------------------------------S--------K----T-NLIVNYLPQNMTQEEF----RSLFGSIGEIESCKLVRDKIT--------------------------------------------------------------------------------------GQSLGYGFVNYIDPKDAEKAINT----LNG--------------------------------------------------------------------------------------LR--L--QTKTIKV-SY-ARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQK------------P--------SGA--T------------------------------------------------------------EPITVKFA-
	6.43e-02	35%	1D8Z Chain A	[89 aa]	MD-----------------------------------S--------K----T-NLIVNYLPQNMTQDEF----KSLFGSIGDIESCKLVRDKIT--------------------------------------------------------------------------------------GQSLGYGFVNYSDPNDADKAINT----LNG--------------------------------------------------------------------------------------LK--L--QTKTIKV-SY-ARP------------------------------------------------------------------------S------------S--------A----SI-----------------------------------------------------------R--------
	7.59e-02	31%	1CVJ Chain A	[89 aa]	PSLRK--------------------------------S--------G----VGNIFIKNLDKSIDNKAL----YDTFSAFGNILSCKVVCD-EN--------------------------------------------------------------------------------------G-SKGYGFVHFETQEAAERAIEK----MNG--------------------------------------------------------------------------------------ML--L--NDRKVFV-GR-FKS------------------------------------------------------------------------R------------K--------E----R---------------------------------------------------------------------
	8.52e-02	29%	1D9A Chain A	[85 aa]	----------------------------------------------D----A-NLYVSGLPKTMSQKEM----EQLFSQYGRIITSRILLDQAT--------------------------------------------------------------------------------------GVSRGVGFIRFDKRIEAEEAIKG----LNG--------------------------------------------------------------------------------------QK--P--LGAAEPI-TV-KFA------------------------------------------------------------------------N------------N--------P----S------------------------------------------------------------Q--------
	1.04e-01	21%	2MST Chain A	[75 aa]	-----------------------------------------------------KIFVGGLSVNTTVEDV----KHYFEQFGKVDDAMLMFDKTT--------------------------------------------------------------------------------------NRHRGFGFVTFESEDIVEK-VCE----IHF--------------------------------------------------------------------------------------HE--I--NNKMVEC-KK-A---------------------------------------------------------------------------------------------------------------------------------------------------------------------------
	1.08e-01	28%	2U2F Chain A	[85 aa]	----------------------------------------------A----H-KLFIGGLPNYLNDDQV----KELLTSFGPLKAFNLVKDSAT--------------------------------------------------------------------------------------GLSKGYAFCEYVDINVTDQAIAG----LNG--------------------------------------------------------------------------------------MQ--L--GDKKLLV-QR-ASV------------------------------------------------------------------------G------------A--------K----N------------------------------------------------------------A--------
	1.24e-01	29%	1CVJ Chain A	[80 aa]	---------------------------------------------------A-SLYVGDLHPDVTEAML----YEKFSPAGPILSIRVCRDMIT--------------------------------------------------------------------------------------RRSLGYAYVNFQQPADAERALDT----MNF--------------------------------------------------------------------------------------DV--I--KGKPVRI-MW-SQ-------------------------------------------------------------------------R------------D-----------------------------------------------------------------------------------
	2.09e-01	28%	1CVJ Chain A	[169 aa]	---------------------------------------------------A-SLYVGDLHPDVTEAML----YEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEK----MNG--------------------------------------------------------------------------------------ML--L--NDRKVFV-GR-FKS------------------------------------------------------------------------R------------K--------E----R---------------------------------------------------------------------
	5.43e-01	34%	1B7F Chain A	[82 aa]	-------------------------------------S--------N----T-NLIVNYLPQDMTDREL----YALFRAIGPINTCRIMRDYKT--------------------------------------------------------------------------------------GYSYGYAFVDFTSEMDSQRAIKV----LNG--------------------------------------------------------------------------------------IT--V--RNKRLKV-SY-ARP------------------------------------------------------------------------G------------------------------------------------------------------------------------------------
	5.79e-01	25%	1HA1	[85 aa]	-------------------------------------EPEQ-----L----R-KLFIGGLSFETTDESL----RSHFEQWGTLTDCVVMRDPNT--------------------------------------------------------------------------------------KRSRGFGFVTYATVEEVDAAMNA----RPH--------------------------------------------------------------------------------------K---V--DGRVVEP-KR-AVS------------------------------------------------------------------------R------------E-----------------------------------------------------------------------------------
	6.60e-01	24%	1P1T Chain A	[104 aa]	-------------------------------------DPAVDRSLRS----V---FVGNIPYEATEEQL----KDIFSEVGPVVSFRLVYDRET--------------------------------------------------------------------------------------GKPKGYGFCEYQDQETALSAMRN----LNG--------------------------------------------------------------------------------------RE--F--SGRALRVDNA-ASE------------------------------------------------------------------------KNKEELKSLGTGAP--------V----I---------------------------------------------------------------------
	1.06e+00	26%	1B7F Chain A	[85 aa]	GESI---------------------------------K--------D----T-NLYVTNLPRTITDDQL----DTIFGKYGSIVQKNILRDKLT--------------------------------------------------------------------------------------GRPRGVAFVRYNKREEAQEAISA----LNN--------------------------------------------------------------------------------------VI--PEGGSQPLSV-RL-A---------------------------------------------------------------------------------------------------------------------------------------------------------------------------
	1.25e+00	25%	1HD1 Chain A	[75 aa]	-----------------------------------------------------KMFIGGLSWDTTKKDL----KDYFSKFGEVVDCTLKLDPIT--------------------------------------------------------------------------------------GRSRGFGFVLFKESESVDK---V----MDQ--------------------------------------------------------------------------------------KEHKL--NGKVIDP-KR-A---------------------------------------------------------------------------------------------------------------------------------------------------------------------------
	1.97e+00	16%	1HA1	[82 aa]	-------------------------------------A--------HLTV-K-KIFVGGIKEDTEEHHL----RDYFEQYGKIEVIEIMTDRGS--------------------------------------------------------------------------------------GKKRGFAFVTFDDHDSVDKIVI-----QKY--------------------------------------------------------------------------------------HT--V--NGHNCEV-RK-AL--------------------------------------------------------------------------------------------------------------------------------------------------------------------------
	1.97e+00	27%	2UP1 Chain A	[183 aa]	-------------------------------------K--------EPEQLR-KLFIGGLSFETTDESL----RSHFEQWGTLTDCVVMRDPNT--------------------------------------------------------------------------------------KRSRGFGFVTYATVEEVDAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHT--V--NGHNCEV-RK-ALS------------------------------------------------------------------------K------------Q--------EMASAS---------------------------------------------------------------------
	2.03e+00	18%	1H6K Chain X	[77 aa]	-------------------------------------K--------S----C-TLYVGNLSFYTTEEQI----YELFSKSGDI--KKIIMGLD----------------------------------------------------------------------------------------KMCGFCFVEYYSRADAENAMRY----ING--------------------------------------------------------------------------------------TR--L--DDRIIRT-DWDAG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------
	2.17e+00	26%	1NO8 Chain A	[78 aa]	---------------------------------------------------G-KLLVSNLDFGVSDADI----QELFAEFGTLKKAAVHYDR-S--------------------------------------------------------------------------------------GRSLGTADVHFERKADALKAMKQ----YNG--------------------------------------------------------------------------------------VP--L--DGRPMNI-QL-VTS-------------------------------------------------------------------------------------------------------------------------------------------------------------------------
	2.56e+00	23%	1URN Chain A	[96 aa]	AVPETR-------------------------------P--------N----H-TIYINNLNEKIKKDELKKSLHAIFSRFGQILDILV---SRS--------------------------------------------------------------------------------------LKMRGQAFVIFKEVSSATNALRS----MQG--------------------------------------------------------------------------------------FP--F--YDKPMRI-QY-AKT------------------------------------------------------------------------DS-----------D--------I----I------------------------------------------------------------AK------M
	2.81e+00	26%	1HL6 Chain A	[119 aa]	AEEFEVDEDGDQGIVRLKEKAKHRKGRGFGPGPQRSVE--------G----W-ILFVTSIHEEAQEDEI----QEKFCDYGEIKNIHLNLDRRT--------------------------------------------------------------------------------------GFSKGYALVEYETHKQALAAKEA----LNG--------------------------------------------------------------------------------------AE--I--MGQTIQV-DW-CFV------------------------------------------------------------------------K------------------------------------------------------------------------------------------------
	3.22e+00	34%	3SXL Chain A	[154 aa]	----------------------------------------------N----T-NLIVNYLPQD-TDREL----YALFRAIGPINTCR-IRDYKT--------------------------------------------------------------------------------------GYSFGYAFVDFTS-EDSQRAIKV----LNG--------------------------------------------------------------------------------------IT--V--RNKRLKV-SY-ARPESI---------------------------------------------------------------------K------------DTNLYVTNLP----RTITDDQLDTIFGKYGSIVQKNILRDKLTGRPRGVAFVRYNKREEAQEAISALNNVPLSVRLA-------

Citation: Kelley LA, MacCallum RM & Sternberg MJE (2000). Enhanced Genome Annotation using Structural Profiles in the Program 3D-PSSM. J. Mol. Biol. 299(2), 501-522.

FUGUE [results]					.........10........20........30........40........50........60........70........80........90........100.......110.......120.......130.......140.......150.......160.......170.......180.......190.......200.......210.......220.......230.......240.......250.......260.......270.......280.......290.......300.......310.......320.......330..
	ZScore	ID	PDB link	AA	-------------------------------------------------------------------------------------------------EGCNLFIYHL----------PQ--EFGDAELMQMFLPFGNVISSKV-----FI--DRA-TNQSK---CFGF-VSF---DNPASAQAAIQA---MNGFQI----GMKRLKVQLKRPKDASRPY-----------------------------------------------------------------------------------------------------------------
	18.53	16.47%	1U2F Chain A	[90 aa]	--------------------------------------------------------------------------------------------------ARRLYVGNI----------PF--GITEEAMMDFFNAQMRLGGLTQAPGNPVL--AVQ-INQDK---NFAF-LEF---RSVDETTQAMAF----DGIIF----QGQSLKIRRPHDYQPLPG------------------------------------------------------------------------------------------------------------------
	16.32	17.07%	1FJC Chain A	[96 aa]	SHMLEDPCTSKKVR-----------------------------------------------------------------------------------AARTLLAKNL----------SF--NITEDELKEVFEDALEIRL------------VSQ-DGKSK---GIAY-IEF---KSEADAEKNLEE---KQGAEI----DGRSVSLYYTGEKGGTRG------------------------------------------------------------------------------------------------------------------
	15.43	16.67%	1FJE Chain B	[175 aa]	GSHMVEGSESTTPFNLFIGNLNPNKSVAELKVAISELFAKNDLAVVDVRTGTNRKFGYVDFESAEDLEKALELTGLKVFGNEIKLEKPKGRDSKKVRAARTLLAKNL----------SF--NITEDELKEVFEDAL-----EI-----RL--VSQ-DGKSK---GIAY-IEF---KSEADAEKNLEE---KQGAEI----DGRSVSLYYTGEKG----------------------------------------------------------------------------------------------------------------------
	15.34	17.05%	1O0P Chain A	[104 aa]	GH-----------------------------------------------------------------------------------------------PTEVLCLMNMVLPEELLDDEEY--EEIVEDVRDECSKYGLVKSIEI-----PRPVDGV-EVPGC---GKIF-VEF---TSVFDCQKAMQG---LTGRKF----ANRVVVTKYCDPDSYHRRDFW---------------------------------------------------------------------------------------------------------------
	15.24	15.19%	1JMT Chain A	[98 aa]	SQTIALLNIYRNPQDGLRS------------------------------------------------------------------------------AVSDVEMQEH----------YD--EFFEEVFTEMEEKYGEVEEMNV-----CD--NL--GDHLV---GNVY-VKF---RREEDAEKAVID---LNNRWF----NGQPIHAELSP-------------------------------------------------------------------------------------------------------------------------
	15.03	36.51%	1CVJ Chain A	[89 aa]	PSLRKSGVGNIFIKNLDKSID------------------------------------------------------------------------------NKALYDTF----------SA---FG------------NILSCKV-----VC--D--EN-GSK---GYGF-VHF---ETQEAAERAIEK---MNGMLL----ND--RKVFVGRFKS-----RKER-------------------------------------------------------------------------------------------------------------
	10.96	21.69%	1QM9 Chain A	[198 aa]	M------------------------------------------------------------------------------------------------GNSVLLVSNLN---------PE--RVTPQSLFILFGVYGDVQRVKI-----LF--N------KK---ENAL-VQM---ADGNQAQLAMSH---LNGHKL----HGKPIRITLSKHQNVQLPREGQEDQGLTKDYGNSPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSVSEEDLKVLFSSNGGVVKGFKFFQKDRKMALIQMGSVEEAVQALIDLHNHDLGENHHLRVSFSKSTI
	3.47	12.20%	1OWX Chain A	[113 aa]	HHGSLEEKI----------------------------------------------------------------------------------------GCLLKFSGDL----------DD--QTCREDLHILFSNHGEIKWIDF--------------VRGA---KEGI-ILF---KEKAKEALGKAKDANNGNLQL----RNKEVTWEVLEGEVEKEALKKIIEDQQESLNKWKSKGR----------------------------------------------------------------------------------------------
	3.23	17.86%	1RAV Chain A	[124 aa]	RKCSLTGKWTND-------------------------------------------------------------------------------------LGSNMTIGAV----------NSRGEFTGTYITAVTATSNEIKESPL-----HG--TEN-TINKRTQPTFGFTVNW---K----FSESTTV---FTGQCFIDRNGKEVLKTMWLLRSSVNDIGDDWKATRVGINIFTRLRT-----------------------------------------------------------------------------------------------
	3.10	10.59%	1TDJ Chain 1	[88 aa]	---------------------------------------------------------------------------------------------------QREALLAV----------TI--PEEKGSFLKFCQLLG-GRSVTE-----FN--YRF-ADAKN---ACIF-VGVRLSRGLEERKEILQM---LNDGGY----SVVDLSDDEMAKLHVRYMV-----------------------------------------------------------------------------------------------------------------

Citation: Shi J., Blundell T. L. and Mizuguchi K.(2001), Fugue: sequence-structure homology recognition using environment-specific substitution tables and structure-dependent gap penalties. J. Mol. Biol. 310(2), 243-257.

A blue score means a significant Hit
* Green represents Mutated residue
* Red represents Helix secondary structure
* Blue represents Strand secondary structure

TITO Query : rrmc

Scores are summarized for each PDB hit and a pseudo-energy score is also computed for each pairwise alignment using TITO. The use of a common scoring scheme makes possible the choice of both the best PDB structure (template) and the best pairwise alignment.

TITO evaluates the compatibility (the pairwise alignment) between the sequence rrmc and each 3D structure (PDB structure) : View TITO input files and TITO Scores
The lower the TITO Score, the better the compatibility and the alignment
Previous PDB sequences that were found by threading servers are sometimes modified/completed for the submission to TITO. They must be in agreement with the completed PDB file sequence. Modified alignment files are indicated by (*) and are accessible by the link View TITO input files and TITO Scores

Summary:

pdb 1g2e
Server Chain Rank in Server Server Score TITO Score
EGCNLFIYHLPQEFGDAELMQMFLPFGNVISSKVFIDRATNQSKCFGFVSFDNPASAQAAIQAMNGFQIGMKRLKVQLKRP------------------------------------------------------------------------KDA--SRP------Y

3D-PSSM A 1 5.98e-02 -55322
SKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPITVKFA-

pdb 1d8z
Server Chain Rank in Server Server Score TITO Score
--EGCNLFIYHLPQEFGDAELMQMFLPFGNVISSKVFIDRATNQSKCFGFVSFDNPASAQAAIQAMNGFQIGMKRLKVQLKRPKDAS-RPY

3D-PSSM A 2 6.43e-02 -57934
MDSKTNLIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITGQSLGYGFVNYSDPNDADKAINTLNGLKLQTKTIKVSYARPSSASIR--

pdb 1cvj
Server Chain Rank in Server Server Score TITO Score
-----------------------------------------------------------------------------------------------------EGC-NLFIYHLPQEFGDAELMQMFLPFGNVISSKVFIDRA-T--------------------------------------------------------------------------------------NQSKCFGFVSFDNPASAQAAIQAMNGFQIGMKRLKVQLKRPKDASRPY-----------------------------------------------------------------------------------------

3D-PSSM A 3 7.59e-02 -59574
ASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPVRIMWSQRDPSLRK----------------SGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCD-E-N--------------------------------------------------------------------------------------G-SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRKER--------------------------------------------------------------------------------------------
(*) This server sequence has been completed
3D-PSSM A 7 1.24e-01 -67548
-------------------------------------------------------------------------------------------------------A-SLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMI-T--------------------------------------------------------------------------------------RRSLGYAYVNFQQPADAERALDTMNFDVIKGKPVRIMWSQ-RD-----PSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRKER
(*) This server sequence has been completed
3D-PSSM A 8 2.09e-01 -22008
-------------------------------------------------------------------------------------------------------A-SLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMI-TRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRKER--------------------------------------------------------------------------------------------

FUGUE A 6 15.03 -34103
ASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSID--N-KALYDTFSA-FG------------NILSCKVVCD--EN---------------------------------------------------------------------------------------GSKGYGFVHFETQEAAERAIEKMNGMLLND--RKVFVGRFKS-----RKER-------------------------------------------------------------------------------------
(*) This server sequence has been completed

pdb 1d9a
Server Chain Rank in Server Server Score TITO Score
EGCNLFIYHLPQEFGDAELMQMFLPFGNVISSKVFIDRATNQSKCFGFVSFDNPASAQAAIQAMNGFQIGMKRLKVQLKRPKDASRPY

3D-PSSM A 4 8.52e-02 -61600
-DANLYVSGLPKTMSQKEMEQLFSQYGRIITSRILLDQATGVSRGVGFIRFDKRIEAEEAIKGLNGQKPLGAAEPITVKFANNPSQ--

pdb 2mst
Server Chain Rank in Server Server Score TITO Score
EGCNLFIYHLPQEFGDAELMQMFLPFGNVISSKVFIDRATNQSKCFGFVSFDNPASAQAAIQAMNGFQIGMKRLKVQLKRPKDASRPY

3D-PSSM A 5 1.04e-01 -60103
---KIFVGGLSVNTTVEDVKHYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEK-VCEIHFHEINNKMVECKKA---------

pdb 2u2f
Server Chain Rank in Server Server Score TITO Score
EGCNLFIYHLPQEFGDAELMQMFLPFGNVISSKVFIDRATNQSKCFGFVSFDNPASAQAAIQAMNGFQIGMKRLKVQLKRPKDASRPY

3D-PSSM A 6 1.08e-01 -53943
-AHKLFIGGLPNYLNDDQVKELLTSFGPLKAFNLVKDSATGLSKGYAFCEYVDINVTDQAIAGLNGMQLGDKKLLVQRASVGAKNA--

pdb 1b7f
Server Chain Rank in Server Server Score TITO Score
--------------------------------------------------------------------------------------EGCNLFIYHLPQEFGDAELMQMFLPFGNVISSKVFIDRATNQSKCFGFVSFDNPASAQAAIQAMNGFQI--GMKRLKVQLKRPKDASRPY-------------------------------------------------------------------------------------

3D-PSSM A 9 5.43e-01 -60789
--------------------------------------------------------------------------------------SNTNLIVNYLPQDMTDRELYALFRAIGPINTCRIMRDYKTGYSYGYAFVDFTSEMDSQRAIKVLNGITV--RNKRLKVSYARPG------GESIKDTNLYVTNLPRTITDDQLDTIFGKYGSIVQKNILRDKLTGRPRGVAFVRYNKREEAQEAISALNNVIPEGGSQPLSVRLA
(*) This server sequence has been completed
3D-PSSM A 12 1.06e+00 -60022
SNTNLIVNYLPQDMTDRELYALFRAIGPINTCRIMRDYKTGYSYGYAFVDFTSEMDSQRAIKVLNGITVRNKRLKVSYARPGGESIKDTNLYVTNLPRTITDDQLDTIFGKYGSIVQKNILRDKLTGRPRGVAFVRYNKREEAQEAISALNNVIPEGGSQPLSVRLA----------------------------------------------------------------------------------------------
(*) This server sequence has been completed

pdb 1ha1
Server Chain Rank in Server Server Score TITO Score
-------------------------------------------------------------------------------------E---G---CNLFIYHLPQEFGDAELMQMFLPFGNVISSKVFIDRATNQSKCFGFVSFDNPASAQAAIQAMNGFQIGMKRLKVQLKRPKDASRPY----------------------------------------------------------------------------------

3D-PSSM - 10 5.79e-01 -59725
-------------------------------------------------------------------------------------EPEQL---RKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNARPHK-VDGRVVEPKRAVSRE-----AHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKAL
(*) This server sequence has been completed
3D-PSSM - 14 1.97e+00 -67579
EPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVDGRVVEPKRAVSREA---HLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVI-QKYHTVNGHNCEVRKAL-------

pdb 1d8z
Server	Chain	Rank in Server	Server Score	TITO Score	--EGCNLFIYHLPQEFGDAELMQMFLPFGNVISSKVFIDRATNQSKCFGFVSFDNPASAQAAIQAMNGFQIGMKRLKVQLKRPKDAS-RPY
3D-PSSM	A	2	6.43e-02	-57934	MDSKTNLIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITGQSLGYGFVNYSDPNDADKAINTLNGLKLQTKTIKVSYARPSSASIR--

pdb 1cvj
Server	Chain	Rank in Server	Server Score	TITO Score	-----------------------------------------------------------------------------------------------------EGC-NLFIYHLPQEFGDAELMQMFLPFGNVISSKVFIDRA-T--------------------------------------------------------------------------------------NQSKCFGFVSFDNPASAQAAIQAMNGFQIGMKRLKVQLKRPKDASRPY-----------------------------------------------------------------------------------------
3D-PSSM	A	3	7.59e-02	-59574	ASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPVRIMWSQRDPSLRK----------------SGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCD-E-N--------------------------------------------------------------------------------------G-SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRKER--------------------------------------------------------------------------------------------	() This server sequence has been completed*
3D-PSSM	A	7	1.24e-01	-67548	-------------------------------------------------------------------------------------------------------A-SLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMI-T--------------------------------------------------------------------------------------RRSLGYAYVNFQQPADAERALDTMNFDVIKGKPVRIMWSQ-RD-----PSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRKER	() This server sequence has been completed*
3D-PSSM	A	8	2.09e-01	-22008	-------------------------------------------------------------------------------------------------------A-SLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMI-TRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRKER--------------------------------------------------------------------------------------------
FUGUE	A	6	15.03	-34103	ASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSID--N-KALYDTFSA-FG------------NILSCKVVCD--EN---------------------------------------------------------------------------------------GSKGYGFVHFETQEAAERAIEKMNGMLLND--RKVFVGRFKS-----RKER-------------------------------------------------------------------------------------	() This server sequence has been completed*

pdb 1d9a
Server	Chain	Rank in Server	Server Score	TITO Score	EGCNLFIYHLPQEFGDAELMQMFLPFGNVISSKVFIDRATNQSKCFGFVSFDNPASAQAAIQAMNGFQIGMKRLKVQLKRPKDASRPY
3D-PSSM	A	4	8.52e-02	-61600	-DANLYVSGLPKTMSQKEMEQLFSQYGRIITSRILLDQATGVSRGVGFIRFDKRIEAEEAIKGLNGQKPLGAAEPITVKFANNPSQ--

pdb 2mst
Server	Chain	Rank in Server	Server Score	TITO Score	EGCNLFIYHLPQEFGDAELMQMFLPFGNVISSKVFIDRATNQSKCFGFVSFDNPASAQAAIQAMNGFQIGMKRLKVQLKRPKDASRPY
3D-PSSM	A	5	1.04e-01	-60103	---KIFVGGLSVNTTVEDVKHYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEK-VCEIHFHEINNKMVECKKA---------

pdb 2u2f
Server	Chain	Rank in Server	Server Score	TITO Score	EGCNLFIYHLPQEFGDAELMQMFLPFGNVISSKVFIDRATNQSKCFGFVSFDNPASAQAAIQAMNGFQIGMKRLKVQLKRPKDASRPY
3D-PSSM	A	6	1.08e-01	-53943	-AHKLFIGGLPNYLNDDQVKELLTSFGPLKAFNLVKDSATGLSKGYAFCEYVDINVTDQAIAGLNGMQLGDKKLLVQRASVGAKNA--

pdb 1b7f
Server	Chain	Rank in Server	Server Score	TITO Score	--------------------------------------------------------------------------------------EGCNLFIYHLPQEFGDAELMQMFLPFGNVISSKVFIDRATNQSKCFGFVSFDNPASAQAAIQAMNGFQI--GMKRLKVQLKRPKDASRPY-------------------------------------------------------------------------------------
3D-PSSM	A	9	5.43e-01	-60789	--------------------------------------------------------------------------------------SNTNLIVNYLPQDMTDRELYALFRAIGPINTCRIMRDYKTGYSYGYAFVDFTSEMDSQRAIKVLNGITV--RNKRLKVSYARPG------GESIKDTNLYVTNLPRTITDDQLDTIFGKYGSIVQKNILRDKLTGRPRGVAFVRYNKREEAQEAISALNNVIPEGGSQPLSVRLA	() This server sequence has been completed*
3D-PSSM	A	12	1.06e+00	-60022	SNTNLIVNYLPQDMTDRELYALFRAIGPINTCRIMRDYKTGYSYGYAFVDFTSEMDSQRAIKVLNGITVRNKRLKVSYARPGGESIKDTNLYVTNLPRTITDDQLDTIFGKYGSIVQKNILRDKLTGRPRGVAFVRYNKREEAQEAISALNNVIPEGGSQPLSVRLA----------------------------------------------------------------------------------------------	() This server sequence has been completed*

pdb 1ha1
Server	Chain	Rank in Server	Server Score	TITO Score	-------------------------------------------------------------------------------------E---G---CNLFIYHLPQEFGDAELMQMFLPFGNVISSKVFIDRATNQSKCFGFVSFDNPASAQAAIQAMNGFQIGMKRLKVQLKRPKDASRPY----------------------------------------------------------------------------------
3D-PSSM	-	10	5.79e-01	-59725	-------------------------------------------------------------------------------------EPEQL---RKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNARPHK-VDGRVVEPKRAVSRE-----AHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKAL	() This server sequence has been completed*
3D-PSSM	-	14	1.97e+00	-67579	EPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVDGRVVEPKRAVSREA---HLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVI-QKYHTVNGHNCEVRKAL-------